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  • Graduate Student Handbook
  • Preface
  • PART I. POLICIES AND RESOURCES
  • CHAPTER 1
    • 🗒️Academic Policies
      • Academic Integrity
      • Policies and Procedures on Ethical Practices in Research
      • The Responsible Conduct in Research and Rigor and Reproducibility Courses
      • Ownership and Use of Research Data, Reagents, Records, Protocols, or Code
      • Responsibilities of Authors
        • Protecting Whistleblowers
        • Financial Conflict of Interest in Research
      • General Rules of Conduct for ISMMS Students
  • CHAPTER 2
    • 🗒️Administrative and Financial Policies
      • Tuition
        • PhD and MD/PhD in Biomedical Sciences or Neuroscience
        • Master’s Degree Programs and PhD in Clinical Research
      • Funding Package and Direct Compensation
      • Financial Assistance and Services
        • Financial Counseling
        • Satisfactory Academic Progress (SAP) for Financial Aid
        • Additional Work and Funding Resources
          • Supplemental Work-in-Another-Department (WIOD)
          • Tuition Waivers for Non-Faculty Mount Sinai Employees
          • Work-Study Positions
          • Travel Awards
  • CHAPTER 3
    • 🗒️Enrollment and Registration
      • Pre-Enrollment Policies
      • Registrar's Office
      • Guidelines for Registration and Cross-Registration
        • Add/Drop
        • Maintenance of Matriculation
        • Full-time Equivalency Status
        • Courses Taken at Partner Institutions
        • Visiting Scholars
        • Non-Matriculating Status and Course Auditing
        • Registration Holds
        • PhD Student Registration
      • Grading Policies
        • Grading, Course Examinations, and Missed Examinations
        • Calculation of GPA
        • Retaking Courses to Improve GPA
        • Graduate School Grade Appeals Process
        • Transfer Credits and Course Exemptions/Waivers
      • Satisfactory Academic Progress Policy
        • Time to Degree Policy
        • Academic Standing
        • Committee for Academic Review (CAR)
          • Membership of CAR
          • Appeals Process
        • Program-Specific Criteria for Satisfactory Academic Progress
      • Leave, Withdrawal, and Readmission
        • Leave of Absence (Voluntary)
        • Leave of Absence (Involuntary)
          • Administrative Leave
          • Academic Progress Leave
        • Parental Leave
        • Return from Military Service
        • Withdrawal and Readmission
        • PhD in Biomedical Sciences and Neuroscience Student Vacation Policy
      • Transcripts
  • Chapter 4
    • 🗒️Student Affairs and Services for Graduate Students
      • Student Services and Resources
        • Career Services and Strategy
        • International Student Services
        • Student Health Services
          • Student Mental Health Services
            • Referrals
            • WellConnect
        • Disability Services
        • Student Housing
          • Real Estate Office
        • Academic Informatics and Technology
          • The Library
          • Aufses Archives and Mount Sinai Records Management Division
          • Academic IT Support Center (ASCIT)
        • Affirmative Action
        • Safety and Security
          • Sexual Assault
          • Harassment
            • Definitions of Unacceptable Behavior
            • Grievance Committee
          • Mistreatment
            • Mistreatment Policy
            • Reporting and Consulting Mechanisms
          • Clery Act
          • Fire Safety
          • Alcohol and Drugs
            • Alcohol Policy – Levinson Student Center
            • Drug Testing
          • Infection Control
        • Office of the Ombudsperson
      • Campus-Wide Policies, Regulations, and Requirements
        • Rules of Conduct
        • Student Behavior
        • Faculty, Staff, and Student Relations
        • FERPA
        • ISMMS Social Media Guideline
        • Acceptable Use of Technology Policy
          • Use of Hardware and Software
          • Web, Data, and Cloud Storage
          • Email and Collaboration Technology Usage
          • Protected Health Information and Other Confidential Information
          • Secure Messaging and Encryption
        • ISMMS Policy on Business Conflicts of Interest
        • Student Intellectual Property
  • PART II. PROGRAMS OF STUDY
  • Chapter 1
    • PhD in Biomedical Sciences and Neuroscience
      • Program Information
      • Program Requirements
        • Curricular Requirements
        • Requirements to Graduate
        • Standards for Maintaining Satisfactory Progress
      • Curriculum
        • Seminars, Works-in-Progress, and Journal Clubs
        • Lab Rotations
          • Rotation Guidelines
          • MD/PhD Student Rotations
      • Selecting a Multidisciplinary Training Areas (MTA)
      • Advising
        • Academic Advisor
        • Selecting a Research Mentor
        • Changes to a Research Mentor-Mentee Partnership
          • Mentoring Changes due to the Relocation of the Research Mentor
          • Mentoring Changes due to an Unproductive Partnership
          • Procedures for Dispute Resolution
        • Thesis Advisory Committee
          • Specific Criteria
          • Procedures
      • Thesis Proposal
        • General Considerations
        • The Written Document
        • The Oral Presentation
        • The Thesis Proposal Committee
        • Deadline
      • Dissertation Defense
        • Written Document Format Options
        • The Dissertation Committee
        • The Defense and Seminar
        • Dissertation Deposit
      • Transfer to Master degree (MPhil or MSBS)
      • Program Specific Policies
        • Program Alumni and Alumni Association
  • Chapter on Multidisciplinary Training Areas
    • Multidisciplinary Training Areas
      • Artificial Intelligence and Emerging Technologies in Medicine (AIET)
        • Typical Curriculum
      • Cancer Biology (CAB)
        • Typical Curriculum
      • Development, Regeneration, and Stem Cells (DRS)
        • Typical Curriculum
      • Disease Mechanisms and Therapeutics (DMT)
        • Typical Curriculum
      • Genetics and Genomic Sciences (GGS)
        • Typical Curriculum
      • Immunology (IMM)
        • Typical Curriculum
      • Microbiology (MIC)
        • Typical Curriculum
      • Neuroscience (NEU)
        • Typical Curriculum
  • Chapter 2
    • MD/PhD Program
      • Program Information
      • Program Requirements
        • Curricular Requirements
        • Requirements to Graduate
        • Standards for Maintaining Satisfactory Progress
      • Curriculum
        • Core Graduate School/PhD Curriculum
        • Medical School/MD Curriculum
        • Annual MD/PhD Retreat
        • Milestones and Maximum Time to Degree
      • Advising
      • Thesis/Dissertation
  • Chapter 3
    • Clinical Research Education Program
      • Program Information
      • Program Competencies
      • Program Requirements
        • Curricular Requirements
          • PhD in Clinical Research (PhDCR)
        • Graduation Requirements
        • Standards for Maintaining Satisfactory Progress
          • Consequences of failure to maintain satisfactory progress
      • Curriculum
        • CRTP and MSCR Curriculum
        • PhDCR Curriculum
        • Requirements for Coursework on Responsible Conduct in Research (RCR)
        • Independent Study
        • Electives Offered in Other Programs or at Other Institutions
      • Advising
        • Faculty Advisors
        • Near-Peer Mentoring Program
        • Thesis Research Mentors (MSCR)
        • Dissertation Research Mentors (PhDCR)
        • Multidisciplinary Advisory Committee (MAC)
      • Master's Thesis
        • Registration, Mentor Selection, and Thesis Proposal
        • Master's Thesis First and Final Drafts
        • Timelines for the Master’s Thesis and Forms
        • Student Checkout Requirements
      • Doctoral Dissertation (PhDCR)
        • Written Dissertation Research Proposal
        • Oral Presentation of Dissertation Research Proposal
        • Admission to Candidacy
        • Written Dissertation, Defense, and Deposit
        • PhDCR Timeline and Required Forms
    • MD-MSCR/PORTAL Program
  • Chapter 4
    • MS in Biomedical Sciences (MSBS)
      • Program Information
      • Program Requirements
        • Curriculum Requirements
        • Requirements to Graduate
        • Standards for Maintaining Satisfactory Progress
      • Curriculum
      • Advising, Thesis Committee, and Research Mentor
      • Changes to a Research Mentor-Mentee Partnership
        • Mentoring Changes due to the Relocation of the Research Mentor
        • Mentoring Changes due to an Unproductive Partnership
        • Procedures for Dispute Resolution
      • MSBS Thesis
        • Formatting, Depositing, and Defending the Thesis
        • The Master’s Thesis Review Committee
        • Deadlines and Publications
        • Required Forms
      • Master's to PhD
  • Chapter 5
    • MS in Biomedical Data Science (MSBDS)
      • Program Information
      • Program Requirements
        • Curricular Requirements
        • Requirements to Graduate
        • Standards for Maintaining Satisfactory Progress
      • Curriculum
      • Advising
      • Capstone Project
  • Chapter 6
    • MS in Biostatistics Program
      • Program Information
      • Program Requirements
      • Curriculum
        • Theory and Methods Track
        • Clinical Applications Track
      • Capstone Project
  • Chapter 7
    • MS in Genetic Counseling
      • Program Information
      • Program Requirements
        • Curricular Requirements
        • Requirements to Graduate
        • Standards for Maintaining Satisfactory Progress
      • Advising
  • Chapter 8
    • MS in Healthcare Delivery Leadership (MSHCDL)
      • Program Information
      • Program Competencies
      • Program Requirements
        • Standards for Maintaining Satisfactory Progress
      • Curriculum
      • Advising
      • Capstone Project
  • Chapter 9
    • Master in Health Administration (MHA)
      • Program Information
      • Program Competencies
      • Program Requirements
      • Curriculum
      • Advising
      • Internship and Capstone Project
        • Students Enrolled or Pursuing 2 Programs
  • Chapter 10
    • Graduate Program in Public Health
      • Master of Public Health (MPH) and Advanced Certificate in Public Health (ACPH)
        • Program Information
        • Additional Information for International Students
        • Program Competencies
        • Program Requirements
          • Curricular Requirements
            • Master of Public Health
            • MD-MPH Program
            • DPM-MPH Program
            • Mount Sinai Residents and Fellow Physicians
            • Advanced Certificate in Public Health
          • Requirements to Graduate
          • Standards for Maintaining Satisfactory Progress
          • Students Enrolled or Pursuing 2 Programs
        • Curriculum
          • General Public Health Track
          • Biostatistics Track
          • Outcomes Research Track
          • Global Health Track
          • Health Care Management Track
          • Environmental Health Sciences Specialty Track
          • Epidemiology Track
          • Health Promotion & Disease Prevention Track
          • Advanced Certificate in Public Health
        • Advising
          • Specialty Track Advisors
        • Culminating Experience
          • Description of the Thesis, First Author Manuscript, and Capstone
          • Public Health Research Day
          • Culminating Experience Submission Deadlines
      • Master of Science in Epidemiology
        • Program Information
        • Additional Information for International Students
        • Program Competencies
        • Program Requirements
          • Requirements to Graduate
          • Standards for Maintaining Satisfactory Progress
        • Curriculum
        • Advising
        • Thesis or First Author Manuscript
          • Public Health Research Day
          • Thesis/Manuscript Submission Deadlines
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  1. Chapter 3
  2. Clinical Research Education Program
  3. Master's Thesis

Registration, Mentor Selection, and Thesis Proposal

PreviousMaster's ThesisNextMaster's Thesis First and Final Drafts

Last updated 1 year ago

Registration for Master’s Thesis Credits (CLR0001)

All students are required to register for at least five master’s thesis credits (course number CLR0001). Students who take CLR0008 Introduction to Health Survey Research Methods for two credits as their chosen elective, must register for at least six credits of CLR0001. Students must register for the master’s thesis credits prior to graduation. They may register for these credits during the Fall, Spring I or Spring II terms of year two. In special cases, student may receive permission from the program to register for these credits in Spring II of year one. In select instances, and in particular for those conducting patient-oriented laboratory research, students will be permitted by the program leadership to apply additional credits towards their master’s thesis in lieu of additional courses.

Mentor Selection and Master’s Thesis Proposal Process

First-year MSCR students should meet early on with their faculty advisors and program administration to identify an appropriate mentor for their thesis project. They may also wish to consult the website, which provides advice and resources for students embarking on mentored research projects. The student, together with their thesis mentor(s), should complete the online form indicating willingness to serve as a thesis research mentor, and specifying the research question and data source. The Research Agreement form must be submitted online by June 1 of the first year in the MSCR program. MSCR program leadership will review the Research Agreement form and either approve or not approve the mentor and choice of project. If not approved, program leadership and the faculty advisor will work with the student to make revisions. The student must then resubmit this form for final approval by the CLR leadership.

Master’s Thesis Proposal and Form

The are due on September 10 of year two, and should be completed and uploaded online. The proposal should be no longer than three pages, must be approved by the thesis research mentor before submitting to the program, and contain the following sections:

  • Study title

  • Rationale for the study/gap in knowledge being addressed

  • Hypothesis

  • Specific aims

  • Patient population

  • Study design and analytical methods

  • Responsibilities of student and skills that will be acquired by student for the project (include what the student will do and how the mentor will help)

  • Timeline for research

  • Whether project requires IRB approval or is exempt

  • Potential statistical tests

  • Possible figures and tables

Once the proposal and form are submitted to the CLR Program, the Director and Associate Director will review and decide if the proposed project is approved or needs to be further refined or revised. If revisions are required, the student must resubmit the proposal for final approval. Students must receive approval from the program before moving forward with their proposed research.

Please note that a student may submit for their Master’s Thesis a first-author manuscript either submitted for publication, accepted for publication or published during their training which is reflective of their Master’s Thesis work. In this instance, a statement of purpose, introduction, and discussion regarding the findings and impact of the work will need to be added.

Students previously in the CRTP Program who transfer into the MSCR Students who are accepted into the MSCR program, having successfully completed the CRTP, will be entering the second year of the MSCR program, since they will have completed in their CRTP program all of the first year MSCR coursework requirements, with the exception of CLR0011 Grant Writing, the three-term Journal Club sequence, and an elective course.

Students who transfer into the MSCR will be required to declare their mentor and research project by submitting the form no later than September 30. Their full proposal will be required by November 15 of that same year.

Emerging Investigators
Research Agreement
Master’s Thesis Proposal and Form
Research Agreement